FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15925539
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG538010.33782844021794173No Hit
TTATCGACTTTCCATT491150.3084040044107769No Hit
AACTTACCTGAATCTC466370.2928440914935438No Hit
GCTGGACACGCCCTGA198090.12438511500301498No Hit
ATTACCTACCGAGGAT181060.11369159938636927No Hit
CATAGTCGACTACTCC161330.10130269374242215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)