FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004947402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3409596
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG94340.276689672324815No Hit
ACTGTCCACAGGTCCC61600.18066656577494813No Hit
CTGGTGGACGCGGTTC59940.17579795377516866No Hit
GTGGTTAACGGCCTGT51610.15136690681242002No Hit
GTGTACTGACAGTCCG42830.1256160553918998No Hit
AAGACAAACAGTACGG42340.12417893498232635No Hit
GGGTGAATGGACAAAT38370.11253532676598636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)