FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004947460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences678857
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA26690.393160857146645No Hit
GTCGACCGATGCTCAA25680.3782829078878173No Hit
CATTCAACTAGGCATG23190.3416036072398163No Hit
GGGGGGGGGGGGGGGG22950.3380682529604909No Hit
ACTGGGCACTTCTCGC19000.27988221377992717No Hit
TGTAAGCTGTTGTGAC18360.27045460236839275No Hit
GCTTTAGGAACTAGTC17470.25734433024922776No Hit
TAGTTGCGACATAGCT10660.15702865257336965No Hit
CATCAGTGATTCGCAA10280.15143100829777112No Hit
CAGGAGCCTCGTGCAC9340.13758420403707997No Hit
CAGGAGCCTTCCAATG7470.11003790194400292No Hit
TCCTTAAACAGGGAGG7090.10444025766840438No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)