FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004947480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2800267
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG89150.3183624990045592No Hit
ACTGTCCACAGGTCCC51330.1833039492305555No Hit
CTGGTGGACGCGGTTC47400.16926957322283911No Hit
GTGGTTAACGGCCTGT43400.15498522105213539No Hit
GTGTACTGACAGTCCG36050.1287377239384673No Hit
AAGACAAACAGTACGG34990.1249523706132308No Hit
GGGTGAATGGACAAAT31580.1127749603877059No Hit
AGCTATCGACGGTTTA29230.10438290348741745No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)