FastQCFastQC Report
Fri 9 Sep 2022
EGAF00004947488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7133008
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG220810.3095608472610713No Hit
CCTAGCACTACAGGCA152820.21424341596140087No Hit
CGTTCTCGAATAACCC88030.12341217057376073No Hit
CATTCCTCTACGCGAA81160.11378089019387053No Hit
TCGATGATGTCCCGTT76560.10733199794532686No Hit

[OK]Adapter Content

Adapter graph