FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16341998
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG447030.2735467229894411No Hit
CACCAGGTGGTTTGGT311290.19048466411512227No Hit
TCCGAGTCTAAAGTAC255580.1563945852887756No Hit
TCTTTCCACATCAGGG170690.10444867267760038No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)