FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004947565

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947565
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5610367
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG156100.2782349176087768No Hit
ACTGTCCACAGGTCCC104730.186672280084351No Hit
CTGGTGGACGCGGTTC100070.17836622809167385No Hit
GTGGTTAACGGCCTGT86500.15417886209583082No Hit
AAGACAAACAGTACGG71040.12662273252355863No Hit
GTGTACTGACAGTCCG70610.12585629424955622No Hit
GGGTGAATGGACAAAT60130.1071765893389862No Hit
AGCTATCGACGGTTTA57880.1031661565099039No Hit
TGTCCCATGGCCAGCT57090.10175804898324833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)