Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004947575 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2491016 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCTGATC | 2435349 | 97.76528934378584 | Illumina PCR Primer Index 9 (100% over 8bp) |
ATCTGATA | 11596 | 0.46551286703899136 | No Hit |
ATCTGCTC | 8091 | 0.32480722725185224 | No Hit |
ATATGATC | 6390 | 0.25652183687298674 | No Hit |
ATCAGATC | 4837 | 0.19417779733249407 | Illumina PCR Primer Index 9 (100% over 8bp) |
ATCTGAAC | 3657 | 0.1468075676751976 | No Hit |
AACTGATC | 3408 | 0.13681164633225962 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)