FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7143264
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG186410.2609591357676267No Hit
CCTAGCACTACAGGCA155700.2179675845663831No Hit
CGTTCTCGAATAACCC82600.11563341352076587No Hit
CATTCCTCTACGCGAA81610.11424749246282931No Hit
TCGATGATGTCCCGTT79260.11095767985055571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)