FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004947633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8022156
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG226220.28199401756834447No Hit
ACTGTCCACAGGTCCC151530.18888937088732755No Hit
CTGGTGGACGCGGTTC141750.1766981345164567No Hit
GTGGTTAACGGCCTGT122700.15295140109466832No Hit
AAGACAAACAGTACGG106080.13223377855030494No Hit
GTGTACTGACAGTCCG101810.12691101993030302No Hit
GGGTGAATGGACAAAT87400.10894826777240432No Hit
TGTCCCATGGCCAGCT84410.1052210901907168No Hit
AGCTATCGACGGTTTA83860.1045354889633161No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)