FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004947664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17010929
Sequences flagged as poor quality0
Sequence length34
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACCG6150.09.5604115
GTGTATA35900.08.7850941
TATACTG18700.08.15994555
TAGACAG31550.07.94247875
GTCTTAG20450.07.8139371
GTATTAG17350.07.75586271
TACACTG28200.07.74422365
CCTATAC12900.07.7051763
TAGACCG5101.8189894E-127.6858215
CCTACAC25250.07.65123653
TCTACAC21200.07.59409243
GTACTAG10550.07.5732231
CTATACT17800.07.55042744
GTGCTAG24750.07.47579051
TACACAG39100.07.3039175
CTAGACA26650.07.24940164
TCTATAC11800.07.2370533
GTGTTAG22550.07.2105731
GTATAAG28500.07.12257533
GTGTAGA24500.07.09437231
Produced by FastQC (version 0.11.5)