FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004947699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17774318
Sequences flagged as poor quality0
Sequence length34
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG20900.09.176355
TAGGACG7200.08.5549184
CTAGGAC24950.08.4162293
GTATAGA15850.08.21486951
TACACCG7850.08.203215
TAGACCG7750.08.1284275
TTATACT23150.08.0425974
TCTATAC13900.07.95626353
TACACTG28600.07.9294795
TAGACAG29900.07.9124535
TAGGACA18800.07.74410344
TTAGGAC17900.07.7424613
CTAAGAC22600.07.68086433
AGGACCG21700.07.6768475
GTCCTAG24750.07.5801281
TGGACTG25850.07.4733315
AGGACTG41600.07.4705975
CCTACAC25400.07.3852973
GTATTAG17500.07.36032061
TCTACAC21900.07.35107043
Produced by FastQC (version 0.11.5)