FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004947713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2831713
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACCTGGCTCCTT82650.2918727992561393No Hit
NNNNNNNNNNNNNNNN81100.2863990806977967No Hit
TCGCGGTGAGTCTTGA76420.26987198208293No Hit
GGGGGGGGGGGGGGGG69450.24525790572702813No Hit
GTTAAGAGAGTACGTT54850.1936990083387688No Hit
CGCTTACTGATCACAC49590.17512367955368358No Hit
TACCAGTGATACGATC45230.15972663896376504No Hit
ATCTTACTGGTTTGGT45180.15955006739736688No Hit
TTGTGGTGAAAGACAT43960.15524172117725207No Hit
ATAGATGGAGAGTAAT42820.1512158894633743No Hit
ATTCCTAACTGCGTGC42710.15082743201729837No Hit
ATATGCCGAGAACAGC40980.14471805581992242No Hit
TGGAACACTTGAGGCA39290.138749936875665No Hit
GCGGTTCGAAGCAAGC38710.13670170670544649No Hit
CTTGACGCTCAGGGTA36550.12907381503704649No Hit
AGGTAGCGATTGACCA35910.12681369898715017No Hit
AGCTCTGCTGGCCTGT35900.12677838467387056No Hit
GCTATACGACAGGTGA35890.1267430703605909No Hit
CTTTCTGCTCTTGTGA35870.12667244173403167No Hit
ACTGGAACTCTGGAAG33160.11710226283525203No Hit
TGTGACTGACCGTTAA32650.1153012328579909No Hit
AGTTCACGACCAGAGA32400.11441837502600016No Hit
ACCCTTTCTAGGTGAC31870.11254671642217978No Hit
TGTACCCTGCTGAGAG31380.11081631507147793No Hit
ACGCTCTTGCCTCAAA31020.10954499979341126No Hit
TTCCAAACTCCGCTAG30230.10675516904432052No Hit
ACACTCCACCGTACAT29900.10558979670609275No Hit
TCCCAGACTCCTAACA29210.1031531090897983No Hit
TCAGTCCACCCAGCAC28960.10227025125780756No Hit
ACATGTGTGTCAATGC28880.10198773675157051No Hit
CACAGCTCTCTCTGGG28390.10025733540086866No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)