FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004947730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5787451
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG158420.27373017931382915No Hit
ACTGTCCACAGGTCCC108610.18766465582170805No Hit
CTGGTGGACGCGGTTC103870.17947452168493522No Hit
GTGGTTAACGGCCTGT89170.15407473860253848No Hit
AAGACAAACAGTACGG74790.12922787596819393No Hit
GTGTACTGACAGTCCG72480.12523648148381733No Hit
GGGTGAATGGACAAAT62150.10738751827013308No Hit
AGCTATCGACGGTTTA60450.10445012838985591No Hit
TGTCCCATGGCCAGCT59010.10196198637362112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)