FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6178007
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG190610.30852991911469185No Hit
ACTGTCCACAGGTCCC112390.18191950899375803No Hit
CTGGTGGACGCGGTTC111200.17999332147082384No Hit
GTGGTTAACGGCCTGT93670.151618475019533No Hit
AAGACAAACAGTACGG77830.12597913857980414No Hit
GTGTACTGACAGTCCG76590.12397201880800718No Hit
GGGTGAATGGACAAAT62900.10181276906937789No Hit
TGTCCCATGGCCAGCT62840.10171565037074254No Hit
AGCTATCGACGGTTTA61990.10033980214007526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)