FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004947849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13878741
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG348380.25101700507272234No Hit
CCTAGCACTACAGGCA291270.20986773944408932No Hit
CGTTCTCGAATAACCC166810.12019101732642752No Hit
CATTCCTCTACGCGAA156690.11289928964017702No Hit
TCGATGATGTCCCGTT149710.10787001501072754No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)