FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6291885
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG193740.307920440376771No Hit
ACTGTCCACAGGTCCC115770.18399891288540715No Hit
CTGGTGGACGCGGTTC111670.1774825827236194No Hit
GTGGTTAACGGCCTGT95260.15140136858826886No Hit
AAGACAAACAGTACGG79370.1261466158392914No Hit
GTGTACTGACAGTCCG75880.12059978845767205No Hit
AGCTATCGACGGTTTA65160.10356196910782699No Hit
GGGTGAATGGACAAAT64820.10302159050904458No Hit
TGTCCCATGGCCAGCT63610.10109847843690722No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)