FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6338874
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG175570.27697348141010536No Hit
ACTGTCCACAGGTCCC122300.19293647420661778No Hit
CTGGTGGACGCGGTTC113230.17862793928385387No Hit
GTGGTTAACGGCCTGT99450.15688906263162827No Hit
AAGACAAACAGTACGG83850.13227901359137284No Hit
GTGTACTGACAGTCCG80610.12716769571378134No Hit
GGGTGAATGGACAAAT71720.1131431228953281No Hit
AGCTATCGACGGTTTA66000.10411943824723445No Hit
TGTCCCATGGCCAGCT65530.10337798164153444No Hit
CATTCAACTCATCTTT64270.10139024691135996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)