FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004947890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7173985
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA706153498.43251693445136No Hit
ACGTTAAA155650.21696449044708066No Hit
ACATTACA118970.1658353063185942No Hit
ACGATACA117710.16407896029891336No Hit
ACGTAACA90130.12563449742367735No Hit
ACGGTACA89670.1249932917339526No Hit
ACCTTACA81100.11304735094929805No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)