Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004947921 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2705840 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTAGATC | 2644049 | 97.71638382165982 | Illumina Single End PCR Primer 1 (100% over 8bp) |
TGTAGATA | 13270 | 0.490420719628655 | No Hit |
TGTAGCTC | 11908 | 0.4400851491588564 | No Hit |
TGTAGAAC | 4298 | 0.15884161665139104 | Illumina DpnII expression Adapter 1 (100% over 8bp) |
AGTAGATC | 4152 | 0.15344588002246992 | No Hit |
TGAAGATC | 4037 | 0.14919581349968958 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)