FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004947951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4161891
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG123400.29649983625231896No Hit
ACTGTCCACAGGTCCC74890.1799422426007793No Hit
CTGGTGGACGCGGTTC72790.17489645932582087No Hit
GTGGTTAACGGCCTGT64150.15413666528027764No Hit
GTGTACTGACAGTCCG53980.12970065770583614No Hit
AAGACAAACAGTACGG51800.12446265411564117No Hit
GGGTGAATGGACAAAT46700.11220860901931358No Hit
AGCTATCGACGGTTTA43190.10377494268831164No Hit
TGTCCCATGGCCAGCT42280.10158843660249632No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)