FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004947963

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947963
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6432531
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG191090.2970681369432965No Hit
ACTGTCCACAGGTCCC117400.18250980834760067No Hit
CTGGTGGACGCGGTTC114810.1784833994581604No Hit
GTGGTTAACGGCCTGT96540.1500808935083251No Hit
AAGACAAACAGTACGG80810.1256270665465895No Hit
GTGTACTGACAGTCCG77990.12124310011098274No Hit
TGTCCCATGGCCAGCT66920.10403369995418599No Hit
GGGTGAATGGACAAAT66400.10322530898024432No Hit
AGCTATCGACGGTTTA65920.1024791019273751No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)