FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004947967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004947967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15895712
Sequences flagged as poor quality0
Sequence length34
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTAG16500.09.0006851
TAGACTG19300.08.8492435
TAGACAG24550.08.4394455
TATACTG16000.08.3995285
TTAGGAC15500.08.3102843
TACACCG7300.08.0543425
CTAGGAC24400.08.0333723
TACACTG26500.07.97691065
TAGGACT19700.07.95904354
CCTACAC25750.07.88406943
GTATAGG12300.07.85954951
TCTAGAC16800.07.8339043
GTGTAAG23650.07.81981471
GTCCTAG23500.07.81010871
CTAGACA21400.07.7847074
CTACACT27650.07.69586664
TAGGACA19400.07.5769894
TATACAG18850.07.57517055
GTGTAGG24750.07.52887541
AGGACCG17750.07.4925375
Produced by FastQC (version 0.11.5)