FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4670983
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA198900.4258204322302179No Hit
CATTCAACTAGGCATG171970.3681666150358501No Hit
GTCGACCGATGCTCAA153450.32851757328168396No Hit
GGGGGGGGGGGGGGGG140470.30072899002201464No Hit
ACTGGGCACTTCTCGC138990.29756049208485663No Hit
TGTAAGCTGTTGTGAC134360.28764823164631514No Hit
GCTTTAGGAACTAGTC96360.2062949062327994No Hit
TAGTTGCGACATAGCT79620.17045662551116114No Hit
CATCAGTGATTCGCAA75800.16227847543011825No Hit
CAGGAGCCTCGTGCAC66200.1417260563782827No Hit
CAGGAGCCTTCCAATG58740.12575511407341883No Hit
TCCTTAAACAGGGAGG53180.11385183803923071No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)