FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3681983
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG105000.2851724193186117No Hit
AGGGCGTCTACACCGC48750.1324014803979269No Hit
NNNNNNNNNNNNNNNN39060.10608413998652357No Hit
CGAACATACTCATTTC39010.10594834359637184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)