FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3285513
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG89230.2715862028243382No Hit
ACTGTCCACAGGTCCC60250.18338079928461706No Hit
CTGGTGGACGCGGTTC58460.17793263943865084No Hit
GTGGTTAACGGCCTGT50630.15410074469344665No Hit
GTGTACTGACAGTCCG41970.12774260823195646No Hit
AAGACAAACAGTACGG41810.12725562187700978No Hit
GGGTGAATGGACAAAT36830.11209817157929372No Hit
AGCTATCGACGGTTTA34160.10397158678112065No Hit
TGTCCCATGGCCAGCT32930.10022787917746787No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)