FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5204132
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG165060.3171710479288381No Hit
ACTGTCCACAGGTCCC99720.1916169689777277No Hit
CTGGTGGACGCGGTTC93960.18054884080572897No Hit
GTGGTTAACGGCCTGT78210.15028442783542No Hit
AAGACAAACAGTACGG68890.13237558155711654No Hit
GTGTACTGACAGTCCG63980.12294077091049957No Hit
GGGTGAATGGACAAAT55370.10639622515339735No Hit
AGCTATCGACGGTTTA55150.10597348414682795No Hit
TGTCCCATGGCCAGCT53970.10370605511159209No Hit
CATTCAACTCATCTTT52230.10036255805963416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)