FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16523947
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT506340.3064279981048112No Hit
AACTTACCTGAATCTC485320.293707066477519No Hit
GGGGGGGGGGGGGGGG460570.27872880492778146No Hit
GCTGGACACGCCCTGA207630.12565399780088862No Hit
ATTACCTACCGAGGAT193860.11732063773867105No Hit
CATAGTCGACTACTCC170330.10308069857643577No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)