FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004948125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16523947
Sequences flagged as poor quality0
Sequence length34
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG19050.09.7006985
CCTATAC14000.09.4005973
CTAGGAC24800.08.9763773
GTGTAAG23850.08.5720461
CTAGTAC8850.08.5429143
TAGGACA17050.08.5395114
TACACTG27600.08.3694895
CTATACT20450.08.2835434
TATACAC26550.08.226513
ATACTGT27400.08.1751076
TAAGACT23750.08.0757154
GTCCTAG23250.08.0705261
GTGTAGG25500.08.0173851
TGTACTG22650.07.84981735
TGGACCG10350.07.84533835
GTATAGG14350.07.80653051
GGACCGT9400.07.744616
CTAACAC27950.07.71426443
AGCGTCA19450.07.70228773
ATACCGT4553.6379788E-117.69223646
Produced by FastQC (version 0.11.5)