FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14995535
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG376190.2508680083771603No Hit
CCTAGCACTACAGGCA325930.21735136492295873No Hit
CGTTCTCGAATAACCC180110.12010908580454116No Hit
CATTCCTCTACGCGAA172380.11495421803890292No Hit
TCGATGATGTCCCGTT166120.11077964207345721No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)