FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15594974
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG491030.314864263319708No Hit
TTATCGACTTTCCATT467270.299628585466061No Hit
ATTACCTACCGAGGAT176860.11340833271026934No Hit
GCTGGACACGCCCTGA167190.10720761701814956No Hit
CATAGTCGACTACTCC157750.10115438473959623No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)