FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004948171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6060513
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG198720.32789303479754933No Hit
ACTGTCCACAGGTCCC109480.1806447738005017No Hit
CTGGTGGACGCGGTTC108890.1796712588521797No Hit
GTGGTTAACGGCCTGT92290.15228083827227165No Hit
AAGACAAACAGTACGG76490.1262104379612749No Hit
GTGTACTGACAGTCCG75940.12530292402639842No Hit
GGGTGAATGGACAAAT64290.10608012886037865No Hit
TGTCCCATGGCCAGCT61930.10218606906709053No Hit
AGCTATCGACGGTTTA61000.10065154550448123No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)