FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3585984
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNN101960.2843292106155521No Hit
GGGGGGGGGGGGGGGG96930.27030237725544787No Hit
AATAGGAACTGAGTAA44290.12350863807535115No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)