FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3262961
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG87300.26754840158984433No Hit
ACTGTCCACAGGTCCC58640.17971406952151742No Hit
CTGGTGGACGCGGTTC57070.17490248887436902No Hit
GTGGTTAACGGCCTGT50440.15458352091857672No Hit
GTGTACTGACAGTCCG40920.1254075669307724No Hit
AAGACAAACAGTACGG40590.12439621558455649No Hit
GGGTGAATGGACAAAT36150.11078894292637882No Hit
AGCTATCGACGGTTTA33370.10226907400977212No Hit
GCGACAAGAACCTGCG32930.10092060554815091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)