FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8122910
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTATCCC793429597.67798732227736No Hit
TTTATCCA605740.7457179754546093No Hit
GTTATCCC199520.2456262595547655No Hit
ATTATCCC192900.23747647087066087No Hit
TTTAACCC142960.1759960408277329No Hit
TTTATACC131490.16187548550950337No Hit
TATATCCC115690.14242432822719936No Hit
TTAATCCC97860.12047406655989049No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)