FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004948341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8122910
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG229810.28291585158520777No Hit
ACTGTCCACAGGTCCC147810.1819668074618579No Hit
CTGGTGGACGCGGTTC141320.1739770599452659No Hit
GTGGTTAACGGCCTGT123220.15169440508389234No Hit
AAGACAAACAGTACGG104190.1282668403318515No Hit
GTGTACTGACAGTCCG100230.12339174015223608No Hit
GGGTGAATGGACAAAT85200.1048885190159684No Hit
AGCTATCGACGGTTTA83260.10250021236231843No Hit
TGTCCCATGGCCAGCT81850.1007643812377584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)