FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13715337
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG452710.3300757392982761No Hit
TTATCGACTTTCCATT410390.2992197712677421No Hit
AACTTACCTGAATCTC386680.2819325547742647No Hit
GCTGGACACGCCCTGA168050.12252706586794039No Hit
ATTACCTACCGAGGAT153280.11175809970983579No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)