FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14821539
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG364520.2459393724227963No Hit
CCTAGCACTACAGGCA320960.21654971187539973No Hit
CGTTCTCGAATAACCC178590.12049356008171622No Hit
CATTCCTCTACGCGAA169400.11429312435098676No Hit
TCGATGATGTCCCGTT162130.10938810065540427No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)