FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004948397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6010871
Sequences flagged as poor quality0
Sequence length8
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGGTAAA590611898.25727419537036No Hit
TAGGAAAA180070.29957388870930685No Hit
AAGGTAAA165640.2755673844938612No Hit
TAGCTAAA116550.19389868789398407No Hit
TACGTAAA90350.150310994862475No Hit
TATGTAAA88580.14736633010423947No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)