FastQCFastQC Report
Sat 10 Sep 2022
EGAF00004948425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19565343
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGCTCT1927633898.52287281648985No Hit
TATGCTCA776740.39699789571795396No Hit
AATGCTCT369640.18892589820684463No Hit
TAAGCTCT254250.12994916572635604No Hit
TATGCACT236430.12084122419934065No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)