FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3193273
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG95740.29981777317504643No Hit
ACTGTCCACAGGTCCC58870.18435630151258597No Hit
CTGGTGGACGCGGTTC56940.17831234598482498No Hit
GTGGTTAACGGCCTGT49410.154731524677032No Hit
AAGACAAACAGTACGG40760.12764333021323263No Hit
GTGTACTGACAGTCCG39590.12397937789847596No Hit
GGGTGAATGGACAAAT36010.11276831013195551No Hit
TGTCCCATGGCCAGCT32880.10296645479418766No Hit
AGCTATCGACGGTTTA32220.10089960989868389No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)