FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4118682
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG133300.323647225010331No Hit
ACTGTCCACAGGTCCC73440.17830946890291605No Hit
CTGGTGGACGCGGTTC71840.17442473101832093No Hit
GTGGTTAACGGCCTGT63880.1550981600424602No Hit
GTGTACTGACAGTCCG52940.12853626475654106No Hit
AAGACAAACAGTACGG52110.12652105697890734No Hit
GGGTGAATGGACAAAT45620.11076358893451838No Hit
AGCTATCGACGGTTTA42150.1023385636473027No Hit
TGTCCCATGGCCAGCT41390.10049331315212001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)