FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004948550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30200406
Sequences flagged as poor quality0
Sequence length34
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAGAC31100.011.74944422
ATCTCCG37200.09.97250310
CACGAGA36850.09.95330221
TCTCCGA38500.09.74488511
CTTATAC42050.09.7237521
CCCACGA38450.09.53913619
TATACAC65300.09.21838953
TATACCG6450.09.1156115
TACACCG12650.08.7424425
CCACGAG44350.08.61725220
TATACTG39050.08.2093855
TCTATAC28100.08.1702873
TTATACA58850.08.0176782
TAGACAG58400.07.93434955
TACACTG55800.07.9026475
TACACAT76300.07.8709825
CTAGGAC46600.07.87073233
GTATTAG33700.07.85324051
TAGGACC32650.07.71770864
TCCGAGC52250.07.58242113
Produced by FastQC (version 0.11.5)