FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4048973
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA154780.38226977557024955No Hit
CATTCAACTAGGCATG146750.3624375860249006No Hit
GTCGACCGATGCTCAA141130.34855752310524174No Hit
ACTGGGCACTTCTCGC116990.28893746636492756No Hit
GGGGGGGGGGGGGGGG116530.2878013758056673No Hit
TGTAAGCTGTTGTGAC112490.2778235369808591No Hit
GCTTTAGGAACTAGTC96050.23722064829772882No Hit
TAGTTGCGACATAGCT66890.16520238588896494No Hit
CATCAGTGATTCGCAA64300.15880570208791217No Hit
CAGGAGCCTCGTGCAC56580.13973913878902133No Hit
CAGGAGCCTTCCAATG50020.12353749950913478No Hit
TCCTTAAACAGGGAGG45790.11309040588811038No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)