FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004948572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2166068
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGCCGACCAGGGAT376151.7365567470642658No Hit
GAAGCAGTGGAACCTT127050.5865466827449554No Hit
GTTCTTCCTAACGTAA111960.5168812798120834No Hit
GATACGTACCGCTCGA109630.5061244614665836No Hit
CGCTTAAGATAATAGG88140.40691243303534336No Hit
CATGGAGGATCGACAT86810.40077227492396356No Hit
TGTCCCATGAGACAAT85860.39638644770154957No Hit
AAAGCATGATCTTTGT80830.3731646467239255No Hit
TGAGCGCACAGGACAC76380.35262050868209127No Hit
TGTCGAAACTTCGCAA72430.33438470075731697No Hit
TAATTGCCTGTCTGGC69000.3185495561542851No Hit
GGGGGGGGGGGGGGGG61940.28595593490139737No Hit
GGAAGGACTAGGTAAT61330.2831397721585841No Hit
AATGATGGAAAGCTAA58740.27118262215221317No Hit
CATGTCAGAGGTTTGT55670.2570094752334645No Hit
TCGACCTTGTTTCGCC52900.2442213263849519No Hit
ATGGGTACTTGGCTGC45180.20858070937754494No Hit
GCTATGATGACCTGCG43380.2002707209561288No Hit
AAACGACCTAGGGAGG41810.19302256438856027No Hit
AGCCTACCTTAACTCG40940.18900606998487582No Hit
CAGCTCACTGTTTACG40780.18826740434741662No Hit
TTGCGATGACATTCAG40600.187436405505275No Hit
TGTTCCTCTTTATGGC38670.17852625125342325No Hit
CAATGTGACCAACGCC36310.16763093310089988No Hit
CCTGTTGACCCTAGTA36030.16633826823534625No Hit
CATGATGTGTCATGTG36030.16633826823534625No Hit
CTGCCTTGACCATAAC35930.16587660221193426No Hit
CACAGCTCTGGACTGA35700.16481477035808662No Hit
TAACCAGACATCACAC35530.16402993811828623No Hit
AGCTTGTGACTCACTC34950.1613522751824966No Hit
GTGAGATCTCGATTAC34890.16107527556844936No Hit
CATGCAAACGAAGGCT33990.1569202813577413No Hit
ATGGGTACTTTCGGGC33190.15322695317044527No Hit
TTGTTTGTGATACGCT33100.15281145374937444No Hit
ATGCCGCGATGCCACG32980.15225745452128003No Hit
TGGGCCATGCGTTCTC32770.1512879558721148No Hit
ATTAGCGTGGTCGGTC32730.15110328946275No Hit
CTATTCAACCGAACGA32690.15091862305338521No Hit
AGAACGCGAGGAATAT31730.14648662922862993No Hit
CCGCTATTGTTCGCAA31410.1450092979537115No Hit
CATTAGTCTATTCTGG31140.1437627996904991No Hit
CACTATACTACGCCAC30720.14182380239216869No Hit
GGGCTGACTAATACAG30550.14103897015236827No Hit
GCATCTCTGAGCCTAT30060.1387768066376494No Hit
GGGTCGTACCGCTCGA30000.13849980702360223No Hit
GCAGATACTCGGCTCA29760.1373918085674134No Hit
GGCTTGCGAGTACGTT29450.13596064389483617No Hit
AACCAACACCGGAATG28900.13342148076607013No Hit
AACGTCCCTTACAGAA28550.13180564968412808No Hit
ATAGGAAACAGACTTC28470.1314363168653985No Hit
AGCTCGGACCTTAAGC28320.1307438178302805No Hit
CCCAATGCTGGAATGC28290.1306053180232569No Hit
GGTAGCCTGTGCCACG28160.1300051521928213No Hit
CTGCCATTGCACAGTT27870.12866632072492645No Hit
GATACCATGTCTGGAT27680.12778915528044366No Hit
TTGACGTGACCTCAAA27650.12765065547342003No Hit
CTGATTACTGCTTTGA27500.12695815643830202No Hit
TTGTAACCTCATCCTC27460.12677349002893723No Hit
TGTTTGTTGCGCTCGA27190.1255269917657248No Hit
TGGAGTTACAAGTCTC26930.12432666010485359No Hit
CGCTTACTGGCCACGT26860.12400349388846518No Hit
CCTACGGGATGGAACG26740.12344949466037078No Hit
GGGATCAGATGAGTAA26580.12271082902291157No Hit
ATAGCCAACATGGCCC26420.12197216338545236No Hit
ATCTTACTGCGCACTG25860.11938683365434512No Hit
TCAGGCTCTTAAAGCA25680.11855583481220348No Hit
CGATCAAACCGATCGC25510.11777100257240308No Hit
CGCTGAGTGTTAGCTG25470.11758633616303829No Hit
TCCAAAGTGAAGGCCA24990.11537033925066065No Hit
CGCTTCCCTGCGCTGT24780.11440084060149543No Hit
CATGTTACTAACGTGG24660.11384684137340102No Hit
TGGGTGCACTTCTGAG24330.11232334349614138No Hit
CTCGGATCTTTCTGAG24210.111769344268047No Hit
CCTCCCTTGTTTCGCC24180.11163084446102339No Hit
AGCCGGTACGCGCAAA24170.11158467785868217No Hit
TACAACCGATTCCATT23980.11070751241419936No Hit
TTCTAACACTACGTTG23950.11056901260717578No Hit
AGTGGTACTCAACGCC23890.11029201299312856No Hit
GTCCTGACTTTACGAC23830.11001501337908136No Hit
CCTTCAGTGTAGCTTG23660.10923018113928094No Hit
AACCACTGAAAACATG23550.10872234851352774No Hit
CTTAGGCCTTATGACC23530.10863001530884532No Hit
GCATAGTACGCTCCTT23440.10821451588777452No Hit
TATCTCCCTGGAATTA23310.10761435005733892No Hit
ATTGAGAGATGATCAC23300.10756818345499773No Hit
AACAGCTACTCGAGAG23140.10682951781753852No Hit
AGAACAATGAGTCGGA22910.1057676859636909No Hit
ACCTGCTTGCCAAACT22890.10567535275900848No Hit
TGGTCCTTGTTTCTGT22800.10525985333793768No Hit
TACGCCTTGGGTTGAG22670.10465968750750208No Hit
CGAGTCTCTTACTTTC22640.10452118770047847No Hit
TGAGATAGACTCATCC22570.10419802148409006No Hit
ATCGCAATGTAACTCG22430.10355168905131326No Hit
GCATGGGCTATGTGGG22420.10350552244897207No Hit
GTAAGAAACGACAAAT22410.10345935584663085No Hit
TTCTATGACCAACGCC22300.10295152322087764No Hit
GTGTACTGAATCACAC22210.10253602379980684No Hit
GCATATCGAGCCGCTA22110.10207435777639484No Hit
ACCTCCATGGAATTGA22100.10202819117405362No Hit
CATGTCAGAACAGGTG21860.1009201927178648No Hit
CGGTTCACTGGAATGC21790.10059702650147642No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)