FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14047162
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG375420.26725683095275754No Hit
CACCAGGTGGTTTGGT269550.19188929407947314No Hit
TCCGAGTCTAAAGTAC205240.14610780455155284No Hit
TCTTTCCACATCAGGG147150.10475425569947865No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)