FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004948587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12776662
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG407220.3187217443804962No Hit
CCTAGCACTACAGGCA268590.21021922627365427No Hit
CGTTCTCGAATAACCC154930.12126015386491401No Hit
CATTCCTCTACGCGAA146590.11473262734820722No Hit
TCGATGATGTCCCGTT136260.10664757352115914No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)