FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004948598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3615655
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGACTAC354255697.9782639660034No Hit
GGGCCTAC132840.3674023102314795No Hit
GGGACTAA92590.25608084842165524No Hit
GGGACAAC66250.18323097751306472No Hit
GGGAATAC41960.11605089534261427No Hit
GGGACTCC36360.10056269196037787No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)