Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004948608 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2460686 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCTGATC | 2402405 | 97.63151413874017 | Illumina PCR Primer Index 9 (100% over 8bp) |
ATCTGATA | 11828 | 0.480678965134113 | No Hit |
ATCTGCTC | 8068 | 0.32787604757372535 | No Hit |
ATATGATC | 7091 | 0.2881716724523161 | No Hit |
ATCAGATC | 5186 | 0.21075423682664104 | Illumina PCR Primer Index 9 (100% over 8bp) |
AACTGATC | 3808 | 0.15475359310371173 | No Hit |
ATCTGAAC | 3606 | 0.14654450019222282 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)