FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948616

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948616
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14036558
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG437370.31159348324567887No Hit
TTATCGACTTTCCATT421930.30059363556222257No Hit
AACTTACCTGAATCTC400730.2854902177585132No Hit
GCTGGACACGCCCTGA167220.11913177005359861No Hit
ATTACCTACCGAGGAT158050.11259882942812617No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)